WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07E5.8.1 Sequence Name  F07E5.8.1
Length (nt)  2475   Chromosome Location  II: 2072221-2075613
Chromosome . Primary Identifier  II Chromosome Location . Start  2072221
Chromosome Location . End  2075613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07E5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017213 F07E5.8 F07E5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07E5.8 F07E5.8 2358   II: 2072361-2072484

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07E5.8.1 2072221 2075613 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42222   94   II: 2072221-2072314 Caenorhabditis elegans
Exon42223   124   II: 2072361-2072484 Caenorhabditis elegans
Exon42224   2140   II: 2072531-2074670 Caenorhabditis elegans
Exon42225   33   II: 2075448-2075480 Caenorhabditis elegans
Exon42226   84   II: 2075530-2075613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07E5.8.1 2072221 2075613 -1

1 Sequence

Length
2475

1 Sequence Ontology Term

Identifier Name Description
transcript