WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16A1.7 Sequence Name  T16A1.7
Length (nt)  1506   Chromosome Location  II: 2086911-2087023
Chromosome . Primary Identifier  II Chromosome Location . Start  2086911
Chromosome Location . End  2087023
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A1.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44917 TRPL-5 57.5 501 Caenorhabditis elegans
 

Other

0 RNAi

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16A1.7 2086911 2087023 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004149 trpl-5 T16A1.7 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16A1.7 2086911 2087023 -1
CDS:T16A1.7 2087072 2087150 -1
CDS:T16A1.7 2087616 2087942 -1
CDS:T16A1.7 2088330 2088506 -1
CDS:T16A1.7 2088552 2088635 -1
CDS:T16A1.7 2088825 2089065 -1
CDS:T16A1.7 2089792 2089938 -1
CDS:T16A1.7 2089985 2090084 -1
CDS:T16A1.7 2090138 2090231 -1
CDS:T16A1.7 2090475 2090618 -1

1 Sequence

Length
1506

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16A1.7.1 T16A1.7.1 3090   II: 2085249-2090636