WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:R52.1 Sequence Name  R52.1
Length (nt)  981   Chromosome Location  II: 2131085-2131197
Chromosome . Primary Identifier  II Chromosome Location . Start  2131085
Chromosome Location . End  2131197
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R52.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12824 SDZ-28 37.4 326 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00052025
WBRNAi00008247
WBRNAi00017902
WBRNAi00034960
WBRNAi00073245
WBRNAi00073244
WBRNAi00084805
WBRNAi00084807

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R52.1 2131085 2131197 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020073 sdz-28 R52.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R52.1 2131085 2131197 1
CDS:R52.1 2131247 2131628 1
CDS:R52.1 2131675 2131813 1
CDS:R52.1 2131866 2132017 1
CDS:R52.1 2132067 2132261 1

1 Sequence

Length
981

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R52.1.1 R52.1.1 1210   II: 2131070-2132475