WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40A11.6.1 Sequence Name  C40A11.6.1
Length (nt)  911   Chromosome Location  II: 2144292-2145666
Chromosome . Primary Identifier  II Chromosome Location . Start  2144292
Chromosome Location . End  2145666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40A11.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016549 C40A11.6 C40A11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40A11.6 C40A11.6 657   II: 2144462-2144634

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C40A11.6.1 2144292 2145666 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42360   343   II: 2144292-2144634 Caenorhabditis elegans
Exon42361   115   II: 2144897-2145011 Caenorhabditis elegans
Exon42362   249   II: 2145058-2145306 Caenorhabditis elegans
Exon42364   204   II: 2145463-2145666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C40A11.6.1 2144292 2145666 -1

1 Sequence

Length
911

1 Sequence Ontology Term

Identifier Name Description
transcript