WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33C12.8.1 Sequence Name  C33C12.8.1
Length (nt)  1588   Chromosome Location  II: 2182494-2186434
Chromosome . Primary Identifier  II Chromosome Location . Start  2182494
Chromosome Location . End  2186434 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33C12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016340 gba-2 C33C12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33C12.8 C33C12.8 1551   II: 2182518-2182749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33C12.8.1 2182494 2186434 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42429   256   II: 2182494-2182749 Caenorhabditis elegans
Exon42430   164   II: 2183259-2183422 Caenorhabditis elegans
Exon42431   81   II: 2183470-2183550 Caenorhabditis elegans
Exon42432   132   II: 2183651-2183782 Caenorhabditis elegans
Exon42433   338   II: 2184051-2184388 Caenorhabditis elegans
Exon42434   73   II: 2184715-2184787 Caenorhabditis elegans
Exon42435   134   II: 2184830-2184963 Caenorhabditis elegans
Exon42436   153   II: 2185363-2185515 Caenorhabditis elegans
Exon42437   204   II: 2185566-2185769 Caenorhabditis elegans
Exon42438   53   II: 2186382-2186434 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33C12.8.1 2182494 2186434 -1

1 Sequence

Length
1588

1 Sequence Ontology Term

Identifier Name Description
transcript