WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59C2A.1.1 Sequence Name  Y59C2A.1.1
Length (nt)  1452   Chromosome Location  II: 2208112-2212806
Chromosome . Primary Identifier  II Chromosome Location . Start  2208112
Chromosome Location . End  2212806 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59C2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021984 Y59C2A.1 Y59C2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59C2A.1 Y59C2A.1 1365   II: 2208118-2208215

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59C2A.1.1 2208112 2212806 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42463   104   II: 2208112-2208215 Caenorhabditis elegans
Exon42464   82   II: 2208272-2208353 Caenorhabditis elegans
Exon42465   164   II: 2208719-2208882 Caenorhabditis elegans
Exon42466   112   II: 2209434-2209545 Caenorhabditis elegans
Exon42467   102   II: 2209606-2209707 Caenorhabditis elegans
Exon42468   222   II: 2210190-2210411 Caenorhabditis elegans
Exon42469   94   II: 2211202-2211295 Caenorhabditis elegans
Exon42470   78   II: 2211348-2211425 Caenorhabditis elegans
Exon42471   128   II: 2211623-2211750 Caenorhabditis elegans
Exon42472   85   II: 2211808-2211892 Caenorhabditis elegans
Exon42473   135   II: 2212469-2212603 Caenorhabditis elegans
Exon42474   146   II: 2212661-2212806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59C2A.1.1 2208112 2212806 1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
transcript