WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59C2A.3.1 Sequence Name  Y59C2A.3.1
Length (nt)  2403   Chromosome Location  II: 2215480-2219921
Chromosome . Primary Identifier  II Chromosome Location . Start  2215480
Chromosome Location . End  2219921 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59C2A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021986 Y59C2A.3 Y59C2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59C2A.3 Y59C2A.3 2349   II: 2215523-2216134

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59C2A.3.1 2215480 2219921 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42475   655   II: 2215480-2216134 Caenorhabditis elegans
Exon42476   444   II: 2216491-2216934 Caenorhabditis elegans
Exon42477   369   II: 2217264-2217632 Caenorhabditis elegans
Exon42478   396   II: 2217795-2218190 Caenorhabditis elegans
Exon42479   459   II: 2218882-2219340 Caenorhabditis elegans
Exon42480   80   II: 2219842-2219921 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59C2A.3.1 2215480 2219921 -1

1 Sequence

Length
2403

1 Sequence Ontology Term

Identifier Name Description
transcript