WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09F6.6.1 Sequence Name  K09F6.6.1
Length (nt)  1971   Chromosome Location  II: 2276742-2279305
Chromosome . Primary Identifier  II Chromosome Location . Start  2276742
Chromosome Location . End  2279305 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09F6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019589 K09F6.6 K09F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09F6.6 K09F6.6 1764   II: 2276790-2276861

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09F6.6.1 2276742 2279305 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42590   120   II: 2276742-2276861 Caenorhabditis elegans
Exon42591   210   II: 2276911-2277120 Caenorhabditis elegans
Exon42592   99   II: 2277167-2277265 Caenorhabditis elegans
Exon42593   158   II: 2277314-2277471 Caenorhabditis elegans
Exon42594   163   II: 2277548-2277710 Caenorhabditis elegans
Exon42595   259   II: 2277800-2278058 Caenorhabditis elegans
Exon42596   155   II: 2278106-2278260 Caenorhabditis elegans
Exon42597   237   II: 2278311-2278547 Caenorhabditis elegans
Exon42598   119   II: 2278596-2278714 Caenorhabditis elegans
Exon42599   177   II: 2278763-2278939 Caenorhabditis elegans
Exon42600   56   II: 2278983-2279038 Caenorhabditis elegans
Exon42601   218   II: 2279088-2279305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09F6.6.1 2276742 2279305 -1

1 Sequence

Length
1971

1 Sequence Ontology Term

Identifier Name Description
transcript