WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1240.3a.1 Sequence Name  ZK1240.3a.1
Length (nt)  1295   Chromosome Location  II: 2320334-2321951
Chromosome . Primary Identifier  II Chromosome Location . Start  2320334
Chromosome Location . End  2321951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1240.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022868 ZK1240.3 ZK1240.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1240.3a ZK1240.3a 915   II: 2320433-2320508

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1240.3a.1 2320334 2321951 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42703   175   II: 2320334-2320508 Caenorhabditis elegans
Exon42704   249   II: 2320571-2320819 Caenorhabditis elegans
Exon42705   184   II: 2320942-2321125 Caenorhabditis elegans
Exon42707   46   II: 2321172-2321217 Caenorhabditis elegans
Exon42709   256   II: 2321264-2321519 Caenorhabditis elegans
Exon42712   385   II: 2321567-2321951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1240.3a.1 2320334 2321951 1

1 Sequence

Length
1295

1 Sequence Ontology Term

Identifier Name Description
transcript