WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1240.8.1 Sequence Name  ZK1240.8.1
Length (nt)  907   Chromosome Location  II: 2326978-2329063
Chromosome . Primary Identifier  II Chromosome Location . Start  2326978
Chromosome Location . End  2329063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1240.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022872 ZK1240.8 ZK1240.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1240.8 ZK1240.8 879   II: 2326995-2327080

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1240.8.1 2326978 2329063 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42726   103   II: 2326978-2327080 Caenorhabditis elegans
Exon42727   256   II: 2327131-2327386 Caenorhabditis elegans
Exon42728   43   II: 2327438-2327480 Caenorhabditis elegans
Exon42729   188   II: 2327528-2327715 Caenorhabditis elegans
Exon42730   230   II: 2328701-2328930 Caenorhabditis elegans
Exon42731   87   II: 2328977-2329063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1240.8.1 2326978 2329063 -1

1 Sequence

Length
907

1 Sequence Ontology Term

Identifier Name Description
transcript