WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16G10.5.1 Sequence Name  F16G10.5.1
Length (nt)  718   Chromosome Location  II: 2367315-2368743
Chromosome . Primary Identifier  II Chromosome Location . Start  2367315
Chromosome Location . End  2368743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16G10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017520 F16G10.5 F16G10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16G10.5 F16G10.5 279   II: 2368249-2368290

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16G10.5.1 2367315 2368743 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42815   61   II: 2367315-2367375 Caenorhabditis elegans
Exon42816   117   II: 2367502-2367618 Caenorhabditis elegans
Exon42817   183   II: 2367976-2368158 Caenorhabditis elegans
Exon42818   85   II: 2368206-2368290 Caenorhabditis elegans
Exon42819   147   II: 2368336-2368482 Caenorhabditis elegans
Exon42820   125   II: 2368619-2368743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16G10.5.1 2367315 2368743 1

1 Sequence

Length
718

1 Sequence Ontology Term

Identifier Name Description
transcript