WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16G10.4.1 Sequence Name  F16G10.4.1
Length (nt)  600   Chromosome Location  II: 2369256-2370089
Chromosome . Primary Identifier  II Chromosome Location . Start  2369256
Chromosome Location . End  2370089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16G10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017519 hpo-25 F16G10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16G10.4 F16G10.4 600   II: 2369256-2369423

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16G10.4.1 2369256 2370089 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42821   168   II: 2369256-2369423 Caenorhabditis elegans
Exon42822   37   II: 2369481-2369517 Caenorhabditis elegans
Exon42823   60   II: 2369563-2369622 Caenorhabditis elegans
Exon42824   134   II: 2369704-2369837 Caenorhabditis elegans
Exon42825   201   II: 2369889-2370089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16G10.4.1 2369256 2370089 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript