WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G2.4.1 Sequence Name  F42G2.4.1
Length (nt)  2037   Chromosome Location  II: 2409633-2412749
Chromosome . Primary Identifier  II Chromosome Location . Start  2409633
Chromosome Location . End  2412749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018353 fbxa-182 F42G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G2.4 F42G2.4 1950   II: 2409712-2409981

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G2.4.1 2409633 2412749 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42883   349   II: 2409633-2409981 Caenorhabditis elegans
Exon42884   652   II: 2410037-2410688 Caenorhabditis elegans
Exon42885   119   II: 2410734-2410852 Caenorhabditis elegans
Exon42886   219   II: 2411432-2411650 Caenorhabditis elegans
Exon42887   270   II: 2411703-2411972 Caenorhabditis elegans
Exon42888   428   II: 2412322-2412749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G2.4.1 2409633 2412749 -1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
transcript