WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G2.3.1 Sequence Name  F42G2.3.1
Length (nt)  1557   Chromosome Location  II: 2419136-2420793
Chromosome . Primary Identifier  II Chromosome Location . Start  2419136
Chromosome Location . End  2420793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018352 fbxc-20 F42G2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G2.3 F42G2.3 1080   II: 2419489-2419559

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G2.3.1 2419136 2420793 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42903   424   II: 2419136-2419559 Caenorhabditis elegans
Exon42904   894   II: 2419611-2420504 Caenorhabditis elegans
Exon42905   239   II: 2420555-2420793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G2.3.1 2419136 2420793 1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript