WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G2.2.1 Sequence Name  F53G2.2.1
Length (nt)  612   Chromosome Location  II: 2481921-2483913
Chromosome . Primary Identifier  II Chromosome Location . Start  2481921
Chromosome Location . End  2483913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018767 F53G2.2 F53G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G2.2 F53G2.2 573   II: 2481938-2481971

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G2.2.1 2481921 2483913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43043   51   II: 2481921-2481971 Caenorhabditis elegans
Exon43044   101   II: 2482017-2482117 Caenorhabditis elegans
Exon43045   96   II: 2482811-2482906 Caenorhabditis elegans
Exon43046   104   II: 2482953-2483056 Caenorhabditis elegans
Exon43047   260   II: 2483654-2483913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G2.2.1 2481921 2483913 1

1 Sequence

Length
612

1 Sequence Ontology Term

Identifier Name Description
transcript