WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G2.13.1 Sequence Name  F53G2.13.1
Length (nt)  1329   Chromosome Location  II: 2483807-2486211
Chromosome . Primary Identifier  II Chromosome Location . Start  2483807
Chromosome Location . End  2486211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G2.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00304220 F53G2.13 F53G2.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G2.13 F53G2.13 588   II: 2485266-2485753

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G2.13.1 2483807 2486211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43048   95   II: 2483807-2483901 Caenorhabditis elegans
Exon43049   129   II: 2483959-2484087 Caenorhabditis elegans
Exon43050   696   II: 2485058-2485753 Caenorhabditis elegans
Exon43051   409   II: 2485803-2486211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G2.13.1 2483807 2486211 1

1 Sequence

Length
1329

1 Sequence Ontology Term

Identifier Name Description
transcript