WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59H5.1.1 Sequence Name  F59H5.1.1
Length (nt)  2561   Chromosome Location  II: 2504878-2514905
Chromosome . Primary Identifier  II Chromosome Location . Start  2504878
Chromosome Location . End  2514905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59H5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019130 gbas-1 F59H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59H5.1 F59H5.1 2277   II: 2504882-2505011

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59H5.1.1 2504878 2514905 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43067   134   II: 2504878-2505011 Caenorhabditis elegans
Exon43068   274   II: 2505640-2505913 Caenorhabditis elegans
Exon43069   221   II: 2507168-2507388 Caenorhabditis elegans
Exon43071   199   II: 2508092-2508290 Caenorhabditis elegans
Exon43072   111   II: 2508393-2508503 Caenorhabditis elegans
Exon43074   336   II: 2509524-2509859 Caenorhabditis elegans
Exon43075   108   II: 2510487-2510594 Caenorhabditis elegans
Exon43076   174   II: 2510647-2510820 Caenorhabditis elegans
Exon43077   189   II: 2511761-2511949 Caenorhabditis elegans
Exon43078   81   II: 2512735-2512815 Caenorhabditis elegans
Exon43079   168   II: 2512866-2513033 Caenorhabditis elegans
Exon43080   220   II: 2514047-2514266 Caenorhabditis elegans
Exon43081   346   II: 2514560-2514905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59H5.1.1 2504878 2514905 1

1 Sequence

Length
2561

1 Sequence Ontology Term

Identifier Name Description
transcript