WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02F6.9.1 Sequence Name  K02F6.9.1
Length (nt)  2483   Chromosome Location  II: 2557777-2564073
Chromosome . Primary Identifier  II Chromosome Location . Start  2557777
Chromosome Location . End  2564073 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019343 nep-18 K02F6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F6.9 K02F6.9 2106   II: 2557829-2558005

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02F6.9.1 2557777 2564073 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43170   229   II: 2557777-2558005 Caenorhabditis elegans
Exon43172   156   II: 2558849-2559004 Caenorhabditis elegans
Exon43174   260   II: 2559057-2559316 Caenorhabditis elegans
Exon43176   166   II: 2559655-2559820 Caenorhabditis elegans
Exon43178   258   II: 2559867-2560124 Caenorhabditis elegans
Exon43180   156   II: 2560180-2560335 Caenorhabditis elegans
Exon43182   213   II: 2561016-2561228 Caenorhabditis elegans
Exon43184   102   II: 2561285-2561386 Caenorhabditis elegans
Exon43186   176   II: 2562084-2562259 Caenorhabditis elegans
Exon43188   189   II: 2562305-2562493 Caenorhabditis elegans
Exon43190   136   II: 2563374-2563509 Caenorhabditis elegans
Exon43192   277   II: 2563561-2563837 Caenorhabditis elegans
Exon43195   165   II: 2563909-2564073 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02F6.9.1 2557777 2564073 -1

1 Sequence

Length
2483

1 Sequence Ontology Term

Identifier Name Description
transcript