WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02F6.9.2 Sequence Name  K02F6.9.2
Length (nt)  2414   Chromosome Location  II: 2557777-2563992
Chromosome . Primary Identifier  II Chromosome Location . Start  2557777
Chromosome Location . End  2563992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F6.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019343 nep-18 K02F6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F6.9 K02F6.9 2106   II: 2557829-2558005

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02F6.9.2 2557777 2563992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43171   229   II: 2557777-2558005 Caenorhabditis elegans
Exon43173   156   II: 2558849-2559004 Caenorhabditis elegans
Exon43175   260   II: 2559057-2559316 Caenorhabditis elegans
Exon43177   166   II: 2559655-2559820 Caenorhabditis elegans
Exon43179   258   II: 2559867-2560124 Caenorhabditis elegans
Exon43181   156   II: 2560180-2560335 Caenorhabditis elegans
Exon43183   213   II: 2561016-2561228 Caenorhabditis elegans
Exon43185   102   II: 2561285-2561386 Caenorhabditis elegans
Exon43187   176   II: 2562084-2562259 Caenorhabditis elegans
Exon43189   189   II: 2562305-2562493 Caenorhabditis elegans
Exon43191   136   II: 2563374-2563509 Caenorhabditis elegans
Exon43193   289   II: 2563561-2563849 Caenorhabditis elegans
Exon43194   84   II: 2563909-2563992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02F6.9.2 2557777 2563992 -1

1 Sequence

Length
2414

1 Sequence Ontology Term

Identifier Name Description
transcript