WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E5.16.1 Sequence Name  F22E5.16.1
Length (nt)  4433   Chromosome Location  II: 2666187-2672420
Chromosome . Primary Identifier  II Chromosome Location . Start  2666187
Chromosome Location . End  2672420 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E5.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005569 sri-57 F22E5.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E5.16 F22E5.16 993   II: 2670552-2670615

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E5.16.1 2666187 2672420 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43394   169   II: 2666187-2666355 Caenorhabditis elegans
Exon43397   114   II: 2666546-2666659 Caenorhabditis elegans
Exon43399   313   II: 2666705-2667017 Caenorhabditis elegans
Exon43402   1165   II: 2667488-2668652 Caenorhabditis elegans
Exon43406   118   II: 2668706-2668823 Caenorhabditis elegans
Exon43408   313   II: 2668872-2669184 Caenorhabditis elegans
Exon43410   219   II: 2669502-2669720 Caenorhabditis elegans
Exon43412   129   II: 2669770-2669898 Caenorhabditis elegans
Exon43415   663   II: 2669953-2670615 Caenorhabditis elegans
Exon43416   118   II: 2670682-2670799 Caenorhabditis elegans
Exon43417   313   II: 2670849-2671161 Caenorhabditis elegans
Exon43418   219   II: 2671526-2671744 Caenorhabditis elegans
Exon43419   129   II: 2671791-2671919 Caenorhabditis elegans
Exon43420   451   II: 2671970-2672420 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E5.16.1 2666187 2672420 -1

1 Sequence

Length
4433

1 Sequence Ontology Term

Identifier Name Description
transcript