WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F34D6.5.1 Sequence Name  F34D6.5.1
Length (nt)  1005   Chromosome Location  II: 2696939-2698478
Chromosome . Primary Identifier  II Chromosome Location . Start  2696939
Chromosome Location . End  2698478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F34D6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005574 sri-62 F34D6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F34D6.5 F34D6.5 1005   II: 2696939-2697011

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F34D6.5.1 2696939 2698478 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43469   73   II: 2696939-2697011 Caenorhabditis elegans
Exon43470   118   II: 2697062-2697179 Caenorhabditis elegans
Exon43472   313   II: 2697230-2697542 Caenorhabditis elegans
Exon43473   219   II: 2697624-2697842 Caenorhabditis elegans
Exon43474   126   II: 2698150-2698275 Caenorhabditis elegans
Exon43475   156   II: 2698323-2698478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F34D6.5.1 2696939 2698478 -1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript