WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08D12.3.1 Sequence Name  F08D12.3.1
Length (nt)  918   Chromosome Location  II: 2779553-2780838
Chromosome . Primary Identifier  II Chromosome Location . Start  2779553
Chromosome Location . End  2780838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08D12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017247 F08D12.3 F08D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08D12.3 F08D12.3 870   II: 2779555-2779603

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08D12.3.1 2779553 2780838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43608   51   II: 2779553-2779603 Caenorhabditis elegans
Exon43609   117   II: 2779656-2779772 Caenorhabditis elegans
Exon43610   111   II: 2779821-2779931 Caenorhabditis elegans
Exon43611   123   II: 2779976-2780098 Caenorhabditis elegans
Exon43612   111   II: 2780168-2780278 Caenorhabditis elegans
Exon43613   126   II: 2780323-2780448 Caenorhabditis elegans
Exon43614   105   II: 2780506-2780610 Caenorhabditis elegans
Exon43615   174   II: 2780665-2780838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08D12.3.1 2779553 2780838 1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
transcript