WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08D12.2.1 Sequence Name  F08D12.2.1
Length (nt)  719   Chromosome Location  II: 2781655-2783083
Chromosome . Primary Identifier  II Chromosome Location . Start  2781655
Chromosome Location . End  2783083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08D12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017246 F08D12.2 F08D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08D12.2 F08D12.2 654   II: 2781670-2781721

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08D12.2.1 2781655 2783083 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43616   67   II: 2781655-2781721 Caenorhabditis elegans
Exon43617   117   II: 2781766-2781882 Caenorhabditis elegans
Exon43618   111   II: 2781923-2782033 Caenorhabditis elegans
Exon43619   123   II: 2782079-2782201 Caenorhabditis elegans
Exon43620   111   II: 2782685-2782795 Caenorhabditis elegans
Exon43621   120   II: 2782843-2782962 Caenorhabditis elegans
Exon43622   70   II: 2783014-2783083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08D12.2.1 2781655 2783083 1

1 Sequence

Length
719

1 Sequence Ontology Term

Identifier Name Description
transcript