WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08D12.1 Sequence Name  F08D12.1
Length (nt)  1908   Chromosome Location  II: 2787482-2787584
Chromosome . Primary Identifier  II Chromosome Location . Start  2787482
Chromosome Location . End  2787584
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08D12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41557 SRPA-72 71.4 635 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00025033
WBRNAi00008613
WBRNAi00043985
WBRNAi00091065
WBRNAi00080978
WBRNAi00076276
WBRNAi00108546
WBRNAi00108621
WBRNAi00060700
WBRNAi00060701
WBRNAi00060702
WBRNAi00060703
WBRNAi00105826
WBRNAi00105825
WBRNAi00105828
WBRNAi00105827
WBRNAi00105830
WBRNAi00105829
WBRNAi00105832
WBRNAi00105831
WBRNAi00105834
WBRNAi00105833
WBRNAi00112157
WBRNAi00108734
WBRNAi00105808
WBRNAi00105810
WBRNAi00105809
WBRNAi00105812
WBRNAi00105811
WBRNAi00105814

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08D12.1 2787482 2787584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017245 srpa-72 F08D12.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08D12.1 2787482 2787584 1
CDS:F08D12.1 2787634 2787754 1
CDS:F08D12.1 2787827 2788197 1
CDS:F08D12.1 2789030 2789183 1
CDS:F08D12.1 2789550 2789655 1
CDS:F08D12.1 2790581 2790781 1
CDS:F08D12.1 2791696 2792100 1
CDS:F08D12.1 2792756 2793202 1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08D12.1.1 F08D12.1.1 2650   II: 2787481-2793943