WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12H6.1.1 Sequence Name  K12H6.1.1
Length (nt)  3214   Chromosome Location  II: 2794016-2800600
Chromosome . Primary Identifier  II Chromosome Location . Start  2794016
Chromosome Location . End  2800600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12H6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003709 nhr-119 K12H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12H6.1 K12H6.1 2127   II: 2795085-2795361

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12H6.1.1 2794016 2800600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43638   1346   II: 2794016-2795361 Caenorhabditis elegans
Exon43639   202   II: 2795826-2796027 Caenorhabditis elegans
Exon43640   137   II: 2796332-2796468 Caenorhabditis elegans
Exon43641   371   II: 2796513-2796883 Caenorhabditis elegans
Exon43642   155   II: 2797550-2797704 Caenorhabditis elegans
Exon43643   265   II: 2797753-2798017 Caenorhabditis elegans
Exon43644   132   II: 2798067-2798198 Caenorhabditis elegans
Exon43645   325   II: 2799056-2799380 Caenorhabditis elegans
Exon43646   175   II: 2800173-2800347 Caenorhabditis elegans
Exon43647   106   II: 2800495-2800600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12H6.1.1 2794016 2800600 -1

1 Sequence

Length
3214

1 Sequence Ontology Term

Identifier Name Description
transcript