WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A2AM.3a.2 Sequence Name  Y110A2AM.3a.2
Length (nt)  1408   Chromosome Location  II: 2894880-2900348
Chromosome . Primary Identifier  II Chromosome Location . Start  2894880
Chromosome Location . End  2900348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AM.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022450 ubc-26 Y110A2AM.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AM.3a Y110A2AM.3a 717   II: 2895597-2895750

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AM.3a.2 2894880 2900348 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43831   49   II: 2894880-2894928 Caenorhabditis elegans
Exon43834   776   II: 2894975-2895750 Caenorhabditis elegans
Exon43837   311   II: 2896786-2897096 Caenorhabditis elegans
Exon43841   187   II: 2899322-2899508 Caenorhabditis elegans
Exon43847   85   II: 2900264-2900348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AM.3a.2 2894880 2900348 -1

1 Sequence

Length
1408

1 Sequence Ontology Term

Identifier Name Description
transcript