WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A2AR.2b.1 Sequence Name  Y110A2AR.2b.1
Length (nt)  1282   Chromosome Location  II: 2901401-2913603
Chromosome . Primary Identifier  II Chromosome Location . Start  2901401
Chromosome Location . End  2913603 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AR.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006710 ubc-15 Y110A2AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AR.2b Y110A2AR.2b 687   II: 2902522-2902539

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AR.2b.1 2901401 2913603 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43848   440   II: 2901401-2901840 Caenorhabditis elegans
Exon43854   117   II: 2902423-2902539 Caenorhabditis elegans
Exon43864   192   II: 2905634-2905825 Caenorhabditis elegans
Exon43872   199   II: 2908642-2908840 Caenorhabditis elegans
Exon43877   266   II: 2910431-2910696 Caenorhabditis elegans
Exon43881   68   II: 2913536-2913603 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AR.2b.1 2901401 2913603 -1

1 Sequence

Length
1282

1 Sequence Ontology Term

Identifier Name Description
transcript