WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A2AR.2i.1 Sequence Name  Y110A2AR.2i.1
Length (nt)  1458   Chromosome Location  II: 2901513-2905827
Chromosome . Primary Identifier  II Chromosome Location . Start  2901513
Chromosome Location . End  2905827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AR.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006710 ubc-15 Y110A2AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AR.2i Y110A2AR.2i 1089   II: 2901790-2901840

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AR.2i.1 2901513 2905827 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43852   328   II: 2901513-2901840 Caenorhabditis elegans
Exon43861   936   II: 2903213-2904148 Caenorhabditis elegans
Exon43868   194   II: 2905634-2905827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AR.2i.1 2901513 2905827 -1

1 Sequence

Length
1458

1 Sequence Ontology Term

Identifier Name Description
transcript