WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11F1.6.1 Sequence Name  T11F1.6.1
Length (nt)  1302   Chromosome Location  II: 2944176-2946533
Chromosome . Primary Identifier  II Chromosome Location . Start  2944176
Chromosome Location . End  2946533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11F1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020430 irld-49 T11F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11F1.6 T11F1.6 1296   II: 2944182-2944275

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11F1.6.1 2944176 2946533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43965   100   II: 2944176-2944275 Caenorhabditis elegans
Exon43966   264   II: 2944565-2944828 Caenorhabditis elegans
Exon43967   201   II: 2944960-2945160 Caenorhabditis elegans
Exon43968   293   II: 2945207-2945499 Caenorhabditis elegans
Exon43969   444   II: 2946090-2946533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11F1.6.1 2944176 2946533 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript