WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11F1.5.1 Sequence Name  T11F1.5.1
Length (nt)  1493   Chromosome Location  II: 2946738-2948434
Chromosome . Primary Identifier  II Chromosome Location . Start  2946738
Chromosome Location . End  2948434 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11F1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005826 srw-79 T11F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11F1.5 T11F1.5 1050   II: 2947181-2947710

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11F1.5.1 2946738 2948434 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43970   973   II: 2946738-2947710 Caenorhabditis elegans
Exon43971   106   II: 2947760-2947865 Caenorhabditis elegans
Exon43972   113   II: 2947913-2948025 Caenorhabditis elegans
Exon43973   274   II: 2948090-2948363 Caenorhabditis elegans
Exon43974   27   II: 2948408-2948434 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11F1.5.1 2946738 2948434 1

1 Sequence

Length
1493

1 Sequence Ontology Term

Identifier Name Description
transcript