WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41H7.5a.1 Sequence Name  C41H7.5a.1
Length (nt)  1100   Chromosome Location  II: 3002511-3003863
Chromosome . Primary Identifier  II Chromosome Location . Start  3002511
Chromosome Location . End  3003863 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41H7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016575 lido-10 C41H7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41H7.5a C41H7.5a 990   II: 3002518-3002784

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41H7.5a.1 3002511 3003863 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44074   274   II: 3002511-3002784 Caenorhabditis elegans
Exon44076   271   II: 3002987-3003257 Caenorhabditis elegans
Exon44077   555   II: 3003309-3003863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41H7.5a.1 3002511 3003863 1

1 Sequence

Length
1100

1 Sequence Ontology Term

Identifier Name Description
transcript