WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y25C1A.3.1 Sequence Name  Y25C1A.3.1
Length (nt)  1818   Chromosome Location  II: 3106065-3108032
Chromosome . Primary Identifier  II Chromosome Location . Start  3106065
Chromosome Location . End  3108032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y25C1A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021290 clec-122 Y25C1A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y25C1A.3 Y25C1A.3 1818   II: 3106065-3107240

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y25C1A.3.1 3106065 3108032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44272   1176   II: 3106065-3107240 Caenorhabditis elegans
Exon44273   109   II: 3107294-3107402 Caenorhabditis elegans
Exon44274   416   II: 3107445-3107860 Caenorhabditis elegans
Exon44275   117   II: 3107916-3108032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y25C1A.3.1 3106065 3108032 1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
transcript