WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T10D4.8 Sequence Name  T10D4.8
Length (nt)  1008   Chromosome Location  II: 3135581-3135656
Chromosome . Primary Identifier  II Chromosome Location . Start  3135581
Chromosome Location . End  3135656
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10D4.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33693 SRI-54 38.1 335 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053047
WBRNAi00018548

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T10D4.8 3135581 3135656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005566 sri-54 T10D4.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T10D4.8 3135581 3135656 -1
CDS:T10D4.8 3135708 3135825 -1
CDS:T10D4.8 3135868 3136180 -1
CDS:T10D4.8 3136680 3136898 -1
CDS:T10D4.8 3136947 3137072 -1
CDS:T10D4.8 3137749 3137904 -1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T10D4.8.1 T10D4.8.1 1008   II: 3135581-3137904