WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y27F2A.6.1 Sequence Name  Y27F2A.6.1
Length (nt)  1590   Chromosome Location  II: 3180479-3183400
Chromosome . Primary Identifier  II Chromosome Location . Start  3180479
Chromosome Location . End  3183400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y27F2A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021298 Y27F2A.6 Y27F2A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y27F2A.6 Y27F2A.6 1464   II: 3180540-3180640

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y27F2A.6.1 3180479 3183400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44390   162   II: 3180479-3180640 Caenorhabditis elegans
Exon44391   178   II: 3180686-3180863 Caenorhabditis elegans
Exon44392   222   II: 3180917-3181138 Caenorhabditis elegans
Exon44393   113   II: 3181182-3181294 Caenorhabditis elegans
Exon44394   69   II: 3181608-3181676 Caenorhabditis elegans
Exon44395   61   II: 3181726-3181786 Caenorhabditis elegans
Exon44396   431   II: 3181833-3182263 Caenorhabditis elegans
Exon44397   193   II: 3182327-3182519 Caenorhabditis elegans
Exon44398   108   II: 3182581-3182688 Caenorhabditis elegans
Exon44399   53   II: 3183348-3183400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y27F2A.6.1 3180479 3183400 -1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
transcript