WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC239.7.1 Sequence Name  ZC239.7.1
Length (nt)  3386   Chromosome Location  II: 3192349-3197066
Chromosome . Primary Identifier  II Chromosome Location . Start  3192349
Chromosome Location . End  3197066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC239.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001541 gcy-15 ZC239.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC239.7 ZC239.7 3315   II: 3192420-3192649

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.7.1 3192349 3197066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44425   301   II: 3192349-3192649 Caenorhabditis elegans
Exon44426   67   II: 3192848-3192914 Caenorhabditis elegans
Exon44427   93   II: 3192960-3193052 Caenorhabditis elegans
Exon44428   183   II: 3193101-3193283 Caenorhabditis elegans
Exon44429   124   II: 3193334-3193457 Caenorhabditis elegans
Exon44430   141   II: 3193506-3193646 Caenorhabditis elegans
Exon44431   187   II: 3193690-3193876 Caenorhabditis elegans
Exon44432   784   II: 3193924-3194707 Caenorhabditis elegans
Exon44433   142   II: 3194750-3194891 Caenorhabditis elegans
Exon44434   488   II: 3194949-3195436 Caenorhabditis elegans
Exon44435   179   II: 3195491-3195669 Caenorhabditis elegans
Exon44436   189   II: 3196192-3196380 Caenorhabditis elegans
Exon44437   102   II: 3196425-3196526 Caenorhabditis elegans
Exon44438   106   II: 3196570-3196675 Caenorhabditis elegans
Exon44439   185   II: 3196720-3196904 Caenorhabditis elegans
Exon44440   115   II: 3196952-3197066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.7.1 3192349 3197066 -1

1 Sequence

Length
3386

1 Sequence Ontology Term

Identifier Name Description
transcript