WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC239.7.1 Sequence Name  ZC239.7.1
Length (nt)  3386   Chromosome Location  II: 3192349-3197066
Chromosome . Primary Identifier  II Chromosome Location . Start  3192349
Chromosome Location . End  3197066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC239.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001541 gcy-15 ZC239.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC239.7 ZC239.7 3315   II: 3192420-3192649

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.7.1 3192349 3197066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44432   301   II: 3192349-3192649 Caenorhabditis elegans
Exon44433   67   II: 3192848-3192914 Caenorhabditis elegans
Exon44434   93   II: 3192960-3193052 Caenorhabditis elegans
Exon44435   183   II: 3193101-3193283 Caenorhabditis elegans
Exon44436   124   II: 3193334-3193457 Caenorhabditis elegans
Exon44437   141   II: 3193506-3193646 Caenorhabditis elegans
Exon44438   187   II: 3193690-3193876 Caenorhabditis elegans
Exon44439   784   II: 3193924-3194707 Caenorhabditis elegans
Exon44440   142   II: 3194750-3194891 Caenorhabditis elegans
Exon44441   488   II: 3194949-3195436 Caenorhabditis elegans
Exon44442   179   II: 3195491-3195669 Caenorhabditis elegans
Exon44443   189   II: 3196192-3196380 Caenorhabditis elegans
Exon44444   102   II: 3196425-3196526 Caenorhabditis elegans
Exon44445   106   II: 3196570-3196675 Caenorhabditis elegans
Exon44446   185   II: 3196720-3196904 Caenorhabditis elegans
Exon44447   115   II: 3196952-3197066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.7.1 3192349 3197066 -1

1 Sequence

Length
3386

1 Sequence Ontology Term

Identifier Name Description
transcript