WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC239.10.1 Sequence Name  ZC239.10.1
Length (nt)  969   Chromosome Location  II: 3201204-3202619
Chromosome . Primary Identifier  II Chromosome Location . Start  3201204
Chromosome Location . End  3202619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC239.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005565 sri-53 ZC239.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC239.10 ZC239.10 969   II: 3201204-3201258

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.10.1 3201204 3202619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44454   55   II: 3201204-3201258 Caenorhabditis elegans
Exon44456   100   II: 3201306-3201405 Caenorhabditis elegans
Exon44457   313   II: 3201458-3201770 Caenorhabditis elegans
Exon44458   219   II: 3202017-3202235 Caenorhabditis elegans
Exon44459   129   II: 3202293-3202421 Caenorhabditis elegans
Exon44460   153   II: 3202467-3202619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC239.10.1 3201204 3202619 -1

1 Sequence

Length
969

1 Sequence Ontology Term

Identifier Name Description
transcript