WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17F4.6c.1 Sequence Name  C17F4.6c.1
Length (nt)  3564   Chromosome Location  II: 3251082-3259299
Chromosome . Primary Identifier  II Chromosome Location . Start  3251082
Chromosome Location . End  3259299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17F4.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001544 gcy-19 C17F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17F4.6c C17F4.6c 3564   II: 3251082-3251255

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6c.1 3251082 3259299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44568   174   II: 3251082-3251255 Caenorhabditis elegans
Exon44571   153   II: 3251413-3251565 Caenorhabditis elegans
Exon44574   98   II: 3251649-3251746 Caenorhabditis elegans
Exon44577   203   II: 3252161-3252363 Caenorhabditis elegans
Exon44580   140   II: 3252423-3252562 Caenorhabditis elegans
Exon44583   124   II: 3252816-3252939 Caenorhabditis elegans
Exon44586   233   II: 3253136-3253368 Caenorhabditis elegans
Exon44589   86   II: 3253417-3253502 Caenorhabditis elegans
Exon44592   373   II: 3253674-3254046 Caenorhabditis elegans
Exon44595   370   II: 3254116-3254485 Caenorhabditis elegans
Exon44598   206   II: 3254937-3255142 Caenorhabditis elegans
Exon44601   128   II: 3255244-3255371 Caenorhabditis elegans
Exon44604   139   II: 3255467-3255605 Caenorhabditis elegans
Exon44607   126   II: 3255666-3255791 Caenorhabditis elegans
Exon44608   18   II: 3256201-3256218 Caenorhabditis elegans
Exon44611   89   II: 3256307-3256395 Caenorhabditis elegans
Exon44613   42   II: 3256576-3256617 Caenorhabditis elegans
Exon44617   123   II: 3257052-3257174 Caenorhabditis elegans
Exon44620   236   II: 3257235-3257470 Caenorhabditis elegans
Exon44623   133   II: 3257517-3257649 Caenorhabditis elegans
Exon44626   110   II: 3257695-3257804 Caenorhabditis elegans
Exon44629   131   II: 3258748-3258878 Caenorhabditis elegans
Exon44631   129   II: 3259171-3259299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17F4.6c.1 3251082 3259299 -1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
transcript