WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E11.1.1 Sequence Name  F02E11.1.1
Length (nt)  2002   Chromosome Location  II: 3278934-3281713
Chromosome . Primary Identifier  II Chromosome Location . Start  3278934
Chromosome Location . End  3281713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017179 wht-4 F02E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E11.1 F02E11.1 1911   II: 3278987-3279040

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E11.1.1 3278934 3281713 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44654   107   II: 3278934-3279040 Caenorhabditis elegans
Exon44655   115   II: 3279085-3279199 Caenorhabditis elegans
Exon44656   110   II: 3279449-3279558 Caenorhabditis elegans
Exon44657   129   II: 3279605-3279733 Caenorhabditis elegans
Exon44658   168   II: 3279786-3279953 Caenorhabditis elegans
Exon44659   348   II: 3279997-3280344 Caenorhabditis elegans
Exon44661   113   II: 3280551-3280663 Caenorhabditis elegans
Exon44662   241   II: 3280713-3280953 Caenorhabditis elegans
Exon44663   229   II: 3280996-3281224 Caenorhabditis elegans
Exon44664   442   II: 3281272-3281713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E11.1.1 3278934 3281713 1

1 Sequence

Length
2002

1 Sequence Ontology Term

Identifier Name Description
transcript