WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39E9.4.1 Sequence Name  F39E9.4.1
Length (nt)  2307   Chromosome Location  II: 3282653-3287174
Chromosome . Primary Identifier  II Chromosome Location . Start  3282653
Chromosome Location . End  3287174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39E9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018196 nep-13 F39E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39E9.4 F39E9.4 2199   II: 3282719-3282723

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39E9.4.1 3282653 3287174 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44665   71   II: 3282653-3282723 Caenorhabditis elegans
Exon44666   283   II: 3282770-3283052 Caenorhabditis elegans
Exon44667   136   II: 3283096-3283231 Caenorhabditis elegans
Exon44671   92   II: 3284825-3284916 Caenorhabditis elegans
Exon44672   115   II: 3284963-3285077 Caenorhabditis elegans
Exon44673   155   II: 3285122-3285276 Caenorhabditis elegans
Exon44674   102   II: 3285334-3285435 Caenorhabditis elegans
Exon44675   180   II: 3285485-3285664 Caenorhabditis elegans
Exon44676   387   II: 3285713-3286099 Caenorhabditis elegans
Exon44677   163   II: 3286290-3286452 Caenorhabditis elegans
Exon44678   410   II: 3286504-3286913 Caenorhabditis elegans
Exon44679   213   II: 3286962-3287174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39E9.4.1 3282653 3287174 1

1 Sequence

Length
2307

1 Sequence Ontology Term

Identifier Name Description
transcript