WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D4.4.1 Sequence Name  T06D4.4.1
Length (nt)  2596   Chromosome Location  II: 3391996-3395584
Chromosome . Primary Identifier  II Chromosome Location . Start  3391996
Chromosome Location . End  3395584 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020293 nep-20 T06D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D4.4 T06D4.4 2505   II: 3392036-3392209

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.4.1 3391996 3395584 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45021   214   II: 3391996-3392209 Caenorhabditis elegans
Exon45022   386   II: 3392256-3392641 Caenorhabditis elegans
Exon45023   157   II: 3392687-3392843 Caenorhabditis elegans
Exon45024   110   II: 3392885-3392994 Caenorhabditis elegans
Exon45025   151   II: 3393042-3393192 Caenorhabditis elegans
Exon45026   114   II: 3393657-3393770 Caenorhabditis elegans
Exon45027   276   II: 3393816-3394091 Caenorhabditis elegans
Exon45028   134   II: 3394137-3394270 Caenorhabditis elegans
Exon45029   97   II: 3394323-3394419 Caenorhabditis elegans
Exon45030   89   II: 3394468-3394556 Caenorhabditis elegans
Exon45031   136   II: 3394624-3394759 Caenorhabditis elegans
Exon45032   228   II: 3394807-3395034 Caenorhabditis elegans
Exon45033   504   II: 3395081-3395584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D4.4.1 3391996 3395584 -1

1 Sequence

Length
2596

1 Sequence Ontology Term

Identifier Name Description
transcript