WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18A12.4b Sequence Name  F18A12.4b
Length (nt)  1944   Chromosome Location  II: 3403919-3404122
Chromosome . Primary Identifier  II Chromosome Location . Start  3403919
Chromosome Location . End  3404122
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A12.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51354 NEP-8, isoform b 74.0 647 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044925
WBRNAi00013493
WBRNAi00089042

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F18A12.4b 3403919 3404122 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017553 nep-8 F18A12.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F18A12.4b 3403919 3404122 1
CDS:F18A12.4b 3404168 3404300 1
CDS:F18A12.4b 3404346 3404437 1
CDS:F18A12.4b 3404483 3404600 1
CDS:F18A12.4b 3404650 3404789 1
CDS:F18A12.4b 3404835 3404936 1
CDS:F18A12.4b 3404986 3405156 1
CDS:F18A12.4b 3405464 3405718 1
CDS:F18A12.4b 3405779 3405941 1
CDS:F18A12.4b 3405985 3406235 1
CDS:F18A12.4b 3406282 3406440 1
CDS:F18A12.4b 3406633 3406788 1

1 Sequence

Length
1944

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18A12.4b.1 F18A12.4b.1 2065   II: 3403852-3406842