WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18A12.1.1 Sequence Name  F18A12.1.1
Length (nt)  2207   Chromosome Location  II: 3416828-3420672
Chromosome . Primary Identifier  II Chromosome Location . Start  3416828
Chromosome Location . End  3420672 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017550 nep-6 F18A12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A12.1 F18A12.1 2181   II: 3416838-3417128

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18A12.1.1 3416828 3420672 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45139   301   II: 3416828-3417128 Caenorhabditis elegans
Exon45140   133   II: 3417191-3417323 Caenorhabditis elegans
Exon45141   92   II: 3417370-3417461 Caenorhabditis elegans
Exon45142   115   II: 3418136-3418250 Caenorhabditis elegans
Exon45143   134   II: 3418297-3418430 Caenorhabditis elegans
Exon45144   102   II: 3418477-3418578 Caenorhabditis elegans
Exon45145   186   II: 3418629-3418814 Caenorhabditis elegans
Exon45146   129   II: 3418870-3418998 Caenorhabditis elegans
Exon45148   255   II: 3419166-3419420 Caenorhabditis elegans
Exon45149   160   II: 3419464-3419623 Caenorhabditis elegans
Exon45150   251   II: 3419791-3420041 Caenorhabditis elegans
Exon45151   159   II: 3420276-3420434 Caenorhabditis elegans
Exon45152   190   II: 3420483-3420672 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18A12.1.1 3416828 3420672 1

1 Sequence

Length
2207

1 Sequence Ontology Term

Identifier Name Description
transcript