WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C8.5.1 Sequence Name  C16C8.5.1
Length (nt)  623   Chromosome Location  II: 3444669-3445385
Chromosome . Primary Identifier  II Chromosome Location . Start  3444669
Chromosome Location . End  3445385 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015843 C16C8.5 C16C8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C8.5 C16C8.5 543   II: 3444728-3444876

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C8.5.1 3444669 3445385 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45213   208   II: 3444669-3444876 Caenorhabditis elegans
Exon45214   340   II: 3444921-3445260 Caenorhabditis elegans
Exon45215   75   II: 3445311-3445385 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C8.5.1 3444669 3445385 -1

1 Sequence

Length
623

1 Sequence Ontology Term

Identifier Name Description
transcript