WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49F6B.4 Sequence Name  Y49F6B.4
Length (nt)  1644   Chromosome Location  II: 3482513-3482529
Chromosome . Primary Identifier  II Chromosome Location . Start  3482513
Chromosome Location . End  3482529
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49F6B.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25338 SMU-2 62.2 547 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00057039
WBRNAi00020798
WBRNAi00091018
WBRNAi00069434
WBRNAi00024233
WBRNAi00037303
WBRNAi00083646
WBRNAi00083747
WBRNAi00062443
WBRNAi00062875
WBRNAi00023358
WBRNAi00024158
WBRNAi00023871

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49F6B.4 3482513 3482529 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004896 smu-2 Y49F6B.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49F6B.4 3482513 3482529 1
CDS:Y49F6B.4 3482583 3482865 1
CDS:Y49F6B.4 3482947 3483183 1
CDS:Y49F6B.4 3484487 3484713 1
CDS:Y49F6B.4 3486612 3486953 1
CDS:Y49F6B.4 3488341 3488671 1
CDS:Y49F6B.4 3489871 3490077 1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49F6B.4.1 Y49F6B.4.1 1823   II: 3482408-3490151