WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W09G10.4a Sequence Name  W09G10.4a
Length (nt)  3756   Chromosome Location  II: 3532890-3532982
Chromosome . Primary Identifier  II Chromosome Location . Start  3532890
Chromosome Location . End  3532982
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G10.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24044 APD-3, isoform a 139.9 1251 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00082978
WBRNAi00061006
WBRNAi00055052
WBRNAi00019758
WBRNAi00036411
WBRNAi00114644
WBRNAi00065632
WBRNAi00090898

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W09G10.4a 3532890 3532982 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:W09G10.4a 3532890 3532982 -1
CDS:W09G10.4a 3533515 3533811 -1
CDS:W09G10.4a 3534567 3534692 -1
CDS:W09G10.4a 3535050 3535385 -1
CDS:W09G10.4a 3537006 3537395 -1
CDS:W09G10.4a 3538336 3538704 -1
CDS:W09G10.4a 3540149 3540809 -1
CDS:W09G10.4a 3541102 3541268 -1
CDS:W09G10.4a 3542613 3543073 -1
CDS:W09G10.4a 3543742 3543865 -1
CDS:W09G10.4a 3544569 3544935 -1
CDS:W09G10.4a 3545761 3545844 -1
CDS:W09G10.4a 3545954 3546042 -1
CDS:W09G10.4a 3546179 3546274 -1
CDS:W09G10.4a 3546326 3546421 -1

1 Sequence

Length
3756

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W09G10.4a.1 W09G10.4a.1 4129   II: 3532527-3546431