WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09G10.4b.1 Sequence Name  W09G10.4b.1
Length (nt)  3053   Chromosome Location  II: 3532890-3544707
Chromosome . Primary Identifier  II Chromosome Location . Start  3532890
Chromosome Location . End  3544707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G10.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09G10.4b W09G10.4b 2940   II: 3532890-3532982

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09G10.4b.1 3532890 3544707 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45426   93   II: 3532890-3532982 Caenorhabditis elegans
Exon45428   297   II: 3533515-3533811 Caenorhabditis elegans
Exon45430   126   II: 3534567-3534692 Caenorhabditis elegans
Exon45432   336   II: 3535050-3535385 Caenorhabditis elegans
Exon45434   390   II: 3537006-3537395 Caenorhabditis elegans
Exon45436   369   II: 3538336-3538704 Caenorhabditis elegans
Exon45438   661   II: 3540149-3540809 Caenorhabditis elegans
Exon45440   167   II: 3541102-3541268 Caenorhabditis elegans
Exon45442   461   II: 3542613-3543073 Caenorhabditis elegans
Exon45444   124   II: 3543742-3543865 Caenorhabditis elegans
Exon45446   29   II: 3544679-3544707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09G10.4b.1 3532890 3544707 -1

1 Sequence

Length
3053

1 Sequence Ontology Term

Identifier Name Description
transcript