WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46E10.4.1 Sequence Name  C46E10.4.1
Length (nt)  1383   Chromosome Location  II: 3717261-3719764
Chromosome . Primary Identifier  II Chromosome Location . Start  3717261
Chromosome Location . End  3719764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46E10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016710 fbxc-52 C46E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46E10.4 C46E10.4 1185   II: 3717267-3717343

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46E10.4.1 3717261 3719764 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon45931   83   II: 3717261-3717343 Caenorhabditis elegans
Exon45932   646   II: 3718094-3718739 Caenorhabditis elegans
Exon45933   165   II: 3719005-3719169 Caenorhabditis elegans
Exon45934   137   II: 3719220-3719356 Caenorhabditis elegans
Exon45935   352   II: 3719413-3719764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46E10.4.1 3717261 3719764 1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
transcript