WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D10.7.1 Sequence Name  F54D10.7.1
Length (nt)  887   Chromosome Location  II: 3820145-3821296
Chromosome . Primary Identifier  II Chromosome Location . Start  3820145
Chromosome Location . End  3821296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018808 F54D10.7 F54D10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D10.7 F54D10.7 795   II: 3820222-3820485

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D10.7.1 3820145 3821296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46168   341   II: 3820145-3820485 Caenorhabditis elegans
Exon46169   420   II: 3820701-3821120 Caenorhabditis elegans
Exon46170   126   II: 3821171-3821296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D10.7.1 3820145 3821296 -1

1 Sequence

Length
887

1 Sequence Ontology Term

Identifier Name Description
transcript