WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D10.9.1 Sequence Name  F54D10.9.1
Length (nt)  1536   Chromosome Location  II: 3829584-3832483
Chromosome . Primary Identifier  II Chromosome Location . Start  3829584
Chromosome Location . End  3832483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018810 F54D10.9 F54D10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D10.9 F54D10.9 1536   II: 3829584-3829770

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D10.9.1 3829584 3832483 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46180   187   II: 3829584-3829770 Caenorhabditis elegans
Exon46181   133   II: 3829827-3829959 Caenorhabditis elegans
Exon46182   218   II: 3830025-3830242 Caenorhabditis elegans
Exon46183   139   II: 3830341-3830479 Caenorhabditis elegans
Exon46184   206   II: 3830549-3830754 Caenorhabditis elegans
Exon46185   130   II: 3830805-3830934 Caenorhabditis elegans
Exon46186   195   II: 3831369-3831563 Caenorhabditis elegans
Exon46187   111   II: 3831633-3831743 Caenorhabditis elegans
Exon46188   90   II: 3831966-3832055 Caenorhabditis elegans
Exon46189   42   II: 3832293-3832334 Caenorhabditis elegans
Exon46190   85   II: 3832399-3832483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D10.9.1 3829584 3832483 -1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
transcript